Poly(ADP-ribosyl)ation directs recruitment and activation of an ATP-dependent chromatin remodeler

Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):13770-4. doi: 10.1073/pnas.0906920106. Epub 2009 Aug 6.

Abstract

Posttranslational modifications play a key role in recruiting chromatin remodeling and modifying enzymes to specific regions of chromosomes to modulate chromatin structure. Alc1 (amplified in liver cancer 1), a member of the SNF2 ATPase superfamily with a carboxy-terminal macrodomain, is encoded by an oncogene implicated in the pathogenesis of hepatocellular carcinoma. Here we show that Alc1 interacts transiently with chromatin-associated proteins, including histones and the poly(ADP-ribose) polymerase Parp1. Alc1 ATPase and chromatin remodeling activities are strongly activated by Parp1 and its substrate NAD and require an intact macrodomain capable of binding poly(ADP-ribose). Alc1 is rapidly recruited to nucleosomes in vitro and to chromatin in cells when Parp1 catalyzes PAR synthesis. We propose that poly(ADP-ribosyl)ation of chromatin-associated Parp1 serves as a mechanism for targeting a SNF2 family remodeler to chromatin.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphatases / chemistry
  • Adenosine Triphosphate / chemistry*
  • Carcinoma, Hepatocellular / metabolism
  • Cell Line
  • Cell Line, Tumor
  • Chromatin / chemistry
  • Chromatin Assembly and Disassembly
  • DNA Helicases / chemistry
  • DNA Helicases / physiology*
  • DNA-Binding Proteins / chemistry
  • DNA-Binding Proteins / physiology*
  • HeLa Cells
  • Humans
  • Liver Neoplasms / metabolism
  • Nucleosomes / metabolism
  • Poly(ADP-ribose) Polymerases / chemistry*
  • Protein Processing, Post-Translational
  • Protein Structure, Tertiary
  • Transcription Factors / chemistry

Substances

  • Chromatin
  • DNA-Binding Proteins
  • Nucleosomes
  • SMARCA1 protein, human
  • Transcription Factors
  • Adenosine Triphosphate
  • Poly(ADP-ribose) Polymerases
  • Adenosine Triphosphatases
  • DNA Helicases
  • CHD1L protein, human