UV induced (6-4) photoproducts are distributed differently than cyclobutane dimers in nucleosomes

Photochem Photobiol. 1990 Apr;51(4):411-7. doi: 10.1111/j.1751-1097.1990.tb01732.x.

Abstract

We have compared the distributions of two stable UV photoproducts in nucleosome core DNA at the single-nucleotide level using a T4 polymerase-exonuclease mapping procedure. The distribution of pyrimidine-pyrimidone (6-4) dimers was uncovered by reversing the major UV photo-product, cis-syn cyclobutane pyrimidine dimer, with E. coli DNA photolyase and photoreactivating light. Whereas the distribution of total UV photoproducts in nucleosome core DNA forms a striking 10.3 base periodic pattern, the distribution of (6-4) dimers is much more random throughout the nucleosome core domain. Therefore, histone-DNA interactions in nucleosomes strongly modulate formation of the major class of UV-induced photoproducts, while having either a constant effect or no effect on (6-4) dimer formation.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Cattle
  • Chromatin / radiation effects
  • DNA / radiation effects*
  • DNA-Directed DNA Polymerase / metabolism
  • Exonucleases / metabolism
  • Nucleosomes / radiation effects*
  • Nucleotide Mapping
  • T-Phages / enzymology
  • Thymus Gland / radiation effects
  • Ultraviolet Rays*

Substances

  • Chromatin
  • Nucleosomes
  • DNA
  • DNA-Directed DNA Polymerase
  • Exonucleases