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Sample GSM206450 Query DataSets for GSM206450
Status Public on Aug 31, 2007
Title CACO2
Sample type RNA
 
Source name CACO2 cell line, RPMI1640, 10%FBS, 2mM L-glutamine, 10mM HEPES
Organism Homo sapiens
Characteristics No treatment. See ATCC/DSMZ for cell line details.
Growth protocol B128RPMI1640, 10%FBS, 2mM L-glutamine, 10mM HEPES
Extracted molecule total RNA
Extraction protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Label biotin
Label protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
 
Hybridization protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Scan protocol Affymetrix standard protocols. See Clin Cancer Res 2005;11(24) December 15, 2005
Description Baseline gene expression for cancer cell line grown in vitro
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings (see Clin Cancer Res 2005;11(24) December 15, 2005). The mean value of replicates was used.
 
Submission date Jun 29, 2007
Last update date Aug 28, 2018
Contact name Guy Cavet
Organization name Genentech, Inc.
Street address 1 DNA Way MS93
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL570
Series (1)
GSE8332 Death receptor O-glycosylation controls tumor-cell sensitivity to the proapoptotic ligand Apo2L/TRAIL
Relations
Reanalyzed by GSE39923
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 419.37
AFFX-BioB-M_at 563.03
AFFX-BioB-3_at 325.09
AFFX-BioC-5_at 985.25
AFFX-BioC-3_at 1000.23
AFFX-BioDn-5_at 1165.69
AFFX-BioDn-3_at 5222.5
AFFX-CreX-5_at 11906.32
AFFX-CreX-3_at 12784.49
AFFX-DapX-5_at 476.76
AFFX-DapX-M_at 1018.59
AFFX-DapX-3_at 1129.22
AFFX-LysX-5_at 139.06
AFFX-LysX-M_at 228.44
AFFX-LysX-3_at 402.35
AFFX-PheX-5_at 136.37
AFFX-PheX-M_at 217.84
AFFX-PheX-3_at 154.76
AFFX-ThrX-5_at 3607.7
AFFX-ThrX-M_at 6176.57

Total number of rows: 54675

Table truncated, full table size 923 Kbytes.




Supplementary file Size Download File type/resource
GSM206450_1.CEL.gz 5.7 Mb (ftp)(http) CEL
GSM206450_2.CEL.gz 5.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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