ado |
Alzheimer's Disease Ontology |
Alzheimer's Disease Ontology is a knowledge-based ontology that encompasses varieties of concepts related to Alzheimer'S Disease, structu... Detail |
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agro |
Agronomy Ontology |
Ontology of agronomic practices, agronomic techniques, and agronomic variables used in agronomic experiments Detail |
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aism |
Ontology for the Anatomy of the Insect SkeletoMuscular system (AISM) |
The AISM contains terms used in insect biodiversity research for describing structures of the exoskeleton and the skeletomuscular system.... Detail |
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amphx |
The Amphioxus Development and Anatomy Ontology |
An ontology for the development and anatomy of Amphioxus (Branchiostoma lanceolatum). Detail |
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apo |
Ascomycete phenotype ontology |
A structured controlled vocabulary for the phenotypes of Ascomycete fungi Detail |
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apollo_sv |
Apollo Structured Vocabulary |
An OWL2 ontology of phenomena in infectious disease epidemiology and population biology for use in epidemic simulation. Detail |
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aro |
Antibiotic Resistance Ontology |
Antibiotic resistance genes and mutations Detail |
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bco |
Biological Collections Ontology |
An ontology to support the interoperability of biodiversity data, including data on museum collections, environmental/metagenomic samples... Detail |
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bfo |
Basic Formal Ontology |
The upper level ontology upon which OBO Foundry ontologies are built. Detail |
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bspo |
Biological Spatial Ontology |
An ontology for representing spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces Detail |
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bto |
BRENDA tissue / enzyme source |
A structured controlled vocabulary for the source of an enzyme comprising tissues, cell lines, cell types and cell cultures. Detail |
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caro |
Common Anatomy Reference Ontology |
An upper level ontology to facilitate interoperability between existing anatomy ontologies for different species Detail |
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cdao |
Comparative Data Analysis Ontology |
a formalization of concepts and relations relevant to evolutionary comparative analysis Detail |
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cdno |
Compositional Dietary Nutrition Ontology |
CDNO provides structured terminologies to describe nutritional attributes of material entities that contribute to human diet. Detail |
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chebi |
Chemical Entities of Biological Interest |
A structured classification of molecular entities of biological interest focusing on 'small' chemical compounds. Detail |
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cheminf |
Chemical Information Ontology |
Includes terms for the descriptors commonly used in cheminformatics software applications and the algorithms which generate them. Detail |
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chiro |
CHEBI Integrated Role Ontology |
CHEBI provides a distinct role hierarchy. Chemicals in the structural hierarchy are connected via a 'has role' relation. CHIRO provides l... Detail |
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chmo |
Chemical Methods Ontology |
CHMO, the chemical methods ontology, describes methods used to Detail |
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cido |
Coronavirus Infectious Disease Ontology |
The Coronavirus Infectious Disease Ontology (CIDO) aims to ontologically represent and standardize various aspects of coronavirus infecti... Detail |
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cio |
Confidence Information Ontology |
An ontology to capture confidence information about annotations. Detail |
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cl |
Cell Ontology |
The Cell Ontology is a structured controlled vocabulary for cell types in animals. Detail |
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clao |
Collembola Anatomy Ontology |
CLAO is an ontology of anatomical terms employed in morphological descriptions for the Class Collembola (Arthropoda: Hexapoda). Detail |
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clo |
Cell Line Ontology |
An ontology to standardize and integrate cell line information and to support computer-assisted reasoning. Detail |
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clyh |
Clytia hemisphaerica Development and Anatomy Ontology |
The Clytia hemisphaerica Development and Anatomy Ontology (CLYH) describes the anatomical and developmental features of the Clytia hemisp... Detail |
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cmo |
Clinical measurement ontology |
Morphological and physiological measurement records generated from clinical and model organism research and health programs. Detail |
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cob |
Core Ontology for Biology and Biomedicine |
COB brings together key terms from a wide range of OBO projects to improve interoperability. Detail |
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colao |
Coleoptera Anatomy Ontology (COLAO) |
The Coleoptera Anatomy Ontology contains terms used for describing the anatomy and phenotype of beetles in biodiversity research. It has ... Detail |
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cro |
Contributor Role Ontology |
A classification of the diverse roles performed in the work leading to a published research output in the sciences. Its purpose to provid... Detail |
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cteno |
Ctenophore Ontology |
An anatomical and developmental ontology for ctenophores (Comb Jellies) Detail |
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cto |
CTO: Core Ontology of Clinical Trials |
The core Ontology of Clinical Trials (CTO) will serve as a structured resource integrating basic terms and concepts in the context of cli... Detail |
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cvdo |
Cardiovascular Disease Ontology |
An ontology to describe entities related to cardiovascular diseases Detail |
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ddanat |
Dictyostelium discoideum anatomy |
A structured controlled vocabulary of the anatomy of the slime-mold Dictyostelium discoideum Detail |
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ddpheno |
Dictyostelium discoideum phenotype ontology |
A structured controlled vocabulary of phenotypes of the slime-mould Dictyostelium discoideum. Detail |
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dideo |
Drug-drug Interaction and Drug-drug Interaction Evidence Ontology |
The Potential Drug-drug Interaction and Potential Drug-drug Interaction Evidence Ontology Detail |
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disdriv |
Disease Drivers Ontology |
Ontology for drivers and triggers of human diseases, built to classify ExO ontology exposure stressors. An application ontology. Built in... Detail |
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doid |
Human Disease Ontology |
An ontology for describing the classification of human diseases organized by etiology. Detail |
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dpo |
Drosophila Phenotype Ontology |
An ontology of commonly encountered and/or high level Drosophila phenotypes. Detail |
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dron |
The Drug Ontology |
An ontology to support comparative effectiveness researchers studying claims data. Detail |
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duo |
Data Use Ontology |
DUO is an ontology which represent data use conditions. Detail |
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ecao |
The Echinoderm Anatomy and Development Ontology |
An ontology for the development and anatomy of the different species of the phylum Echinodermata (NCBITaxon:7586). Detail |
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eco |
Evidence and Conclusion Ontology |
An ontology for experimental and other evidence statements. Detail |
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ecocore |
An ontology of core ecological entities |
Ecocore is a community ontology for the concise and controlled description of ecological traits of organisms. Detail |
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ecto |
Environmental conditions, treatments and exposures ontology |
ECTO describes exposures to experimental treatments of plants and model organisms (e.g. exposures to modification of diet, lighting level... Detail |
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emapa |
Mouse Developmental Anatomy Ontology |
An ontology for mouse anatomy covering embryonic development and postnatal stages. Detail |
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envo |
Environment Ontology |
An ontology of environmental systems, components, and processes. Detail |
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epio |
Epilepsy Ontology |
A application driven Epilepsy Ontology with official terms from the ILAE. Detail |
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exo |
Exposure ontology |
Vocabularies for describing exposure data to inform understanding of environmental health. Detail |
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fao |
Fungal gross anatomy |
A structured controlled vocabulary for the anatomy of fungi. Detail |
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fbbt |
Drosophila gross anatomy |
An ontology representing the gross anatomy of Drosophila melanogaster. Detail |
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fbcv |
FlyBase Controlled Vocabulary |
A structured controlled vocabulary used for various aspects of annotation by FlyBase. Detail |
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fbdv |
Drosophila development |
A structured controlled vocabulary of the development of Drosophila melanogaster. Detail |
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fideo |
Food Interactions with Drugs Evidence Ontology |
Food-Drug interactions automatically extracted from scientific literature Detail |
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flopo |
Flora Phenotype Ontology |
Traits and phenotypes of flowering plants occurring in digitized Floras Detail |
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fobi |
Food-Biomarker Ontology |
FOBI (Food-Biomarker Ontology) is an ontology to represent food intake data and associate it with metabolomic data Detail |
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foodon |
Food Ontology |
A broadly scoped ontology representing entities which bear a “food role”. It encompasses materials in natural ecosystems and agriculture ... Detail |
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fovt |
FuTRES Ontology of Vertebrate Traits |
FuTRES Ontology of Vertebrate Traits is an application ontology used to convert vertebrate trait data in spreadsheet to triples. FOVT lev... Detail |
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fypo |
Fission Yeast Phenotype Ontology |
FYPO is a formal ontology of phenotypes observed in fission yeast. Detail |
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gallont |
Plant Gall Ontology |
Ontology of plant gall phenotypes. Plant galls are novel plant structures, generated by plants in response to biotic stressors. This onto... Detail |
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gecko |
Genomics Cohorts Knowledge Ontology |
An ontology to represent genomics cohort attributes Detail |
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genepio |
Genomic Epidemiology Ontology |
The Genomic Epidemiology Ontology (GenEpiO) covers vocabulary necessary to identify, document and research foodborne pathogens and associ... Detail |
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geno |
Genotype Ontology |
An integrated ontology for representing the genetic variations described in genotypes, and their causal relationships to phenotype and di... Detail |
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geo |
Geographical Entity Ontology |
An ontology of geographical entities Detail |
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gno |
Glycan Naming and Subsumption Ontology (GNOme) |
GlyTouCan provides stable accessions for glycans described at varyious degrees of characterization, including compositions (no linkage) a... Detail |
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go |
Gene Ontology |
An ontology for describing the function of genes and gene products Detail |
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hancestro |
Human Ancestry Ontology |
The Human Ancestry Ontology (HANCESTRO) provides a systematic description of the ancestry concepts used in the NHGRI-EBI Catalog of publi... Detail |
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hao |
Hymenoptera Anatomy Ontology |
A structured controlled vocabulary of the anatomy of the Hymenoptera (bees, wasps, and ants) Detail |
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hom |
Homology Ontology |
This ontology represents concepts related to homology, as well as other concepts used to describe similarity and non-homology. Detail |
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hsapdv |
Human Developmental Stages |
Life cycle stages for Human Detail |
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hso |
Health Surveillance Ontology |
The health Surveillance Ontology (HSO) focuses on "surveillance system level data", that is, data outputs from surveillance activities, s... Detail |
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htn |
Hypertension Ontology |
An ontology for representing clinical data about hypertension, intended to support classification of patients according to various diagno... Detail |
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iao |
Information Artifact Ontology |
An ontology of information entities. Detail |
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iceo |
Integrative and Conjugative Element Ontology |
ICEO is an integrated biological ontology for the description of bacterial integrative and conjugative elements (ICEs). Detail |
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ico |
Informed Consent Ontology |
An ontology of clinical informed consents Detail |
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ido |
Infectious Disease Ontology |
A set of interoperable ontologies that will together provide coverage of the infectious disease domain. IDO core is the upper-level ontol... Detail |
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ino |
Interaction Network Ontology |
An ontology of interactions and interaction networks Detail |
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labo |
clinical LABoratory Ontology |
LABO is an ontology of informational entities formalizing clinical laboratory tests prescriptions and reporting documents. Detail |
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lepao |
Lepidoptera Anatomy Ontology |
The Lepidoptera Anatomy Ontology contains terms used for describing the anatomy and phenotype of moths and butterflies in biodiversity re... Detail |
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ma |
Mouse adult gross anatomy |
A structured controlled vocabulary of the adult anatomy of the mouse (Mus). Detail |
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maxo |
Medical Action Ontology |
The Medical Action Ontology (MAxO) provides a broad view of medical actions and includes terms for medical procedures, interventions, the... Detail |
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mco |
Microbial Conditions Ontology |
Microbial Conditions Ontology is an ontology... Detail |
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mcro |
Model Card Report Ontology |
An ontology representing the structure of model card reports - reports that describe basic characteristics of machine learning models for... Detail |
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mf |
Mental Functioning Ontology |
The Mental Functioning Ontology is an overarching ontology for all aspects of mental functioning. Detail |
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mfoem |
Emotion Ontology |
An ontology of affective phenomena such as emotions, moods, appraisals and subjective feelings. Detail |
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mfomd |
Mental Disease Ontology |
An ontology to describe and classify mental diseases such as schizophrenia, annotated with DSM-IV and ICD codes where applicable Detail |
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mi |
Molecular Interactions Controlled Vocabulary |
A structured controlled vocabulary for the annotation of experiments concerned with protein-protein interactions. Detail |
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miapa |
MIAPA Ontology |
An application ontology to formalize annotation of phylogenetic data. Detail |
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mmo |
Measurement method ontology |
A representation of the variety of methods used to make clinical and phenotype measurements. Detail |
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mmusdv |
Mouse Developmental Stages |
Life cycle stages for Mus Musculus Detail |
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mod |
Protein modification |
PSI-MOD is an ontology consisting of terms that describe protein chemical modifications Detail |
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mondo |
Mondo Disease Ontology |
A global community effort to harmonize multiple disease resources to yield a coherent merged ontology. Detail |
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mop |
Molecular Process Ontology |
Processes at the molecular level Detail |
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mp |
Mammalian Phenotype Ontology |
Standard terms for annotating mammalian phenotypic data. Detail |
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mpath |
Mouse pathology ontology |
A structured controlled vocabulary of mutant and transgenic mouse pathology phenotypes Detail |
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mpio |
Minimum PDDI Information Ontology |
An ontology of minimum information regarding potential drug-drug interaction information. Detail |
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mro |
MHC Restriction Ontology |
An ontology for Major Histocompatibility Complex (MHC) restriction in experiments Detail |
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ms |
Mass spectrometry ontology |
A structured controlled vocabulary for the annotation of experiments concerned with proteomics mass spectrometry. Detail |
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nbo |
Neuro Behavior Ontology |
An ontology of human and animal behaviours and behavioural phenotypes Detail |
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ncbitaxon |
NCBI organismal classification |
An ontology representation of the NCBI organismal taxonomy Detail |
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ncit |
NCI Thesaurus OBO Edition |
NCI Thesaurus (NCIt)is a reference terminology that includes broad coverage of the cancer domain, including cancer related diseases, find... Detail |
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ncro |
Non-Coding RNA Ontology |
An ontology for non-coding RNA, both of biological origin, and engineered. Detail |
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ngbo |
Next Generation Biobanking Ontology |
The Next Generation Biobanking Ontology (NGBO) is an open application ontology representing contextual data about omics digital assets in... Detail |
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nomen |
NOMEN - A nomenclatural ontology for biological names |
NOMEN is a nomenclatural ontology for biological names (not concepts). It encodes the goverened rules of nomenclature. Detail |
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oae |
Ontology of Adverse Events |
A biomedical ontology in the domain of adverse events Detail |
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oarcs |
Ontology of Arthropod Circulatory Systems |
OArCS is an ontology describing the Arthropod ciruclatory system. Detail |
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oba |
Ontology of Biological Attributes |
A collection of biological attributes (traits) covering all kingdoms of life. Detail |
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obcs |
Ontology of Biological and Clinical Statistics |
A biomedical ontology in the domain of biological and clinical statistics. Detail |
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obi |
Ontology for Biomedical Investigations |
An integrated ontology for the description of life-science and clinical investigations Detail |
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obib |
Ontology for Biobanking |
An ontology built for annotation and modeling of biobank repository and biobanking administration Detail |
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occo |
Occupation Ontology |
An ontology representing occupations. It is designed to facilitate harmonization of existing occupation standards, such as the US Bureau ... Detail |
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ogg |
The Ontology of Genes and Genomes |
A formal ontology of genes and genomes of biological organisms. Detail |
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ogms |
Ontology for General Medical Science |
An ontology for representing treatment of disease and diagnosis and on carcinomas and other pathological entities Detail |
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ohd |
Oral Health and Disease Ontology |
The Oral Health and Disease Ontology is used for representing the diagnosis and treatment of dental maladies. Detail |
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ohmi |
Ontology of Host-Microbiome Interactions |
The Ontology of Host-Microbiome Interactions aims to ontologically represent and standardize various entities and relations related to mi... Detail |
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ohpi |
Ontology of Host Pathogen Interactions |
OHPI is a community-driven ontology of host-pathogen interactions (OHPI) and represents the virulence factors (VFs) and how the mutants o... Detail |
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omit |
Ontology for MIRNA Target |
Ontology to establish data exchange standards and common data elements in the microRNA (miR) domain Detail |
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omo |
OBO Metadata Ontology |
An ontology specifies terms that are used to annotate ontology terms for all OBO ontologies. The ontology was developed as part of Inform... Detail |
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omp |
Ontology of Microbial Phenotypes |
An ontology of phenotypes covering microbes Detail |
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omrse |
Ontology for Modeling and Representation of Social Entities |
The Ontology for Modeling and Representation of Social Entities (OMRSE) is an OBO Foundry ontology that represents the various entities t... Detail |
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one |
Ontology for Nutritional Epidemiology |
An ontology to standardize research output of nutritional epidemiologic studies. Detail |
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ons |
Ontology for Nutritional Studies |
An ontology for description of concepts in the nutritional studies domain. Detail |
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ontoavida |
OntoAvida: ontology for Avida digital evolution platform |
OntoAvida develops an integrated vocabulary for the description of the most widely-used computational approach for studying evolution usi... Detail |
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ontoneo |
Obstetric and Neonatal Ontology |
The Obstetric and Neonatal Ontology is a structured controlled vocabulary to provide a representation of the data from electronic health ... Detail |
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oostt |
Ontology of Organizational Structures of Trauma centers and Trauma systems |
An ontology built for representating the organizational components of trauma centers and trauma systems. Detail |
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opl |
Ontology for Parasite LifeCycle |
A reference ontology for parasite life cycle stages. Detail |
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opmi |
Ontology of Precision Medicine and Investigation |
The Ontology of Precision Medicine and Investigation (OPMI) aims to ontologically represent and standardize various entities and relation... Detail |
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ornaseq |
Ontology of RNA Sequencing |
An application ontology designed to annotate next-generation sequencing experiments performed on RNA. Detail |
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ovae |
Ontology of Vaccine Adverse Events |
A biomedical ontology in the domain of vaccine adverse events. Detail |
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pato |
Phenotype And Trait Ontology |
An ontology of phenotypic qualities (properties, attributes or characteristics) Detail |
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pcl |
Provisional Cell Ontology |
Cell types that are provisionally defined by experimental techniques such as single cell or single nucleus transcriptomics rather than a ... Detail |
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pco |
Population and Community Ontology |
An ontology about groups of interacting organisms such as populations and communities Detail |
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pdro |
The Prescription of Drugs Ontology |
An ontology to describe entities related to prescription of drugs Detail |
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peco |
Plant Experimental Conditions Ontology |
A structured, controlled vocabulary which describes the treatments, growing conditions, and/or study types used in plant biology experime... Detail |
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phipo |
Pathogen Host Interaction Phenotype Ontology |
PHIPO is a formal ontology of species-neutral phenotypes observed in pathogen-host interactions. Detail |
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plana |
planaria-ontology |
PLANA, the planarian anatomy ontology, encompasses the anatomy and life cycle stages for both __Schmidtea mediterranea__ biotypes. Detail |
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planp |
Planarian Phenotype Ontology |
Planarian Phenotype Ontology is an ontology of phenotypes observed in the planarian Schmidtea mediterranea. Detail |
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po |
Plant Ontology |
The Plant Ontology is a structured vocabulary and database resource that links plant anatomy, morphology and growth and development to pl... Detail |
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poro |
Porifera Ontology |
An ontology covering the anatomy of the taxon Porifera (sponges) Detail |
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ppo |
Plant Phenology Ontology |
An ontology for describing the phenology of individual plants and populations of plants, and for integrating plant phenological data acro... Detail |
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pr |
PRotein Ontology (PRO) |
An ontological representation of protein-related entities Detail |
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proco |
Process Chemistry Ontology |
PROCO covers process chemistry, the chemical field concerned with scaling up laboratory syntheses to commercially viable processes. Detail |
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psdo |
Performance Summary Display Ontology |
Ontology to reproducibly study visualizations of clinical performance Detail |
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pso |
Plant Stress Ontology |
The Plant Stress Ontology describes biotic and abiotic stresses that a plant may encounter. Detail |
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pw |
Pathway ontology |
A controlled vocabulary for annotating gene products to pathways. Detail |
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rbo |
Radiation Biology Ontology |
RBO is an ontology for the effects of radiation on biota in terrestrial and space environments. Detail |
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ro |
Relation Ontology |
Relationship types shared across multiple ontologies Detail |
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rs |
Rat Strain Ontology |
Ontology of rat strains Detail |
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rxno |
Name Reaction Ontology |
Connects organic name reactions to their roles in an organic synthesis and to processes in MOP Detail |
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sepio |
Scientific Evidence and Provenance Information Ontology |
An ontology for representing the provenance of scientific claims and the evidence that supports them. Detail |
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slso |
Space Life Sciences Ontology |
The Space Life Sciences Ontology is an application ontology and is intended to support the operation of NASA's Life Sciences Data Archive... Detail |
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so |
Sequence types and features ontology |
A structured controlled vocabulary for sequence annotation, for the exchange of annotation data and for the description of sequence objec... Detail |
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spd |
Spider Ontology |
An ontology for spider comparative biology including anatomical parts (e.g. leg, claw), behavior (e.g. courtship, combing) and products (... Detail |
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stato |
The Statistical Methods Ontology |
STATO is a general-purpose STATistics Ontology. Its aim is to provide coverage for processes such as statistical tests, their conditions ... Detail |
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swo |
Software ontology |
The Software Ontology (SWO) is a resource for describing software tools, their types, tasks, versions, provenance and associated data. It... Detail |
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symp |
Symptom Ontology |
An ontology of disease symptoms, with symptoms encompasing perceived changes in function, sensations or appearance reported by a patient ... Detail |
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t4fs |
terms4FAIRskills |
A terminology for the skills necessary to make data FAIR and to keep it FAIR. Detail |
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taxrank |
Taxonomic rank vocabulary |
A vocabulary of taxonomic ranks (species, family, phylum, etc) Detail |
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to |
Plant Trait Ontology |
A controlled vocabulary to describe phenotypic traits in plants. Detail |
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trans |
Pathogen Transmission Ontology |
An ontology representing the disease transmission process during which the pathogen is transmitted directly or indirectly from its natura... Detail |
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tto |
Teleost taxonomy ontology |
An ontology covering the taxonomy of teleosts (bony fish) Detail |
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txpo |
Toxic Process Ontology |
TOXic Process Ontology (TXPO) systematizes a wide variety of terms involving toxicity courses and processes. The first version of TXPO fo... Detail |
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uberon |
Uberon multi-species anatomy ontology |
An integrated cross-species anatomy ontology covering animals and bridging multiple species-specific ontologies Detail |
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uo |
Units of measurement ontology |
Metrical units for use in conjunction with PATO Detail |
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upheno |
Unified phenotype ontology (uPheno) |
The uPheno ontology integrates multiple phenotype ontologies into a unified cross-species phenotype ontology. Detail |
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vbo |
Vertebrate Breed Ontology |
Vertebrate Breed Ontology is an ontology created to serve as a single computable resource for vertebrate breed names. Detail |
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vo |
Vaccine Ontology |
VO is a biomedical ontology in the domain of vaccine and vaccination. Detail |
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vt |
Vertebrate trait ontology |
An ontology of traits covering vertebrates Detail |
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vto |
Vertebrate Taxonomy Ontology |
Comprehensive hierarchy of extinct and extant vertebrate taxa. Detail |
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wbbt |
C. elegans Gross Anatomy Ontology |
A structured controlled vocabulary of the anatomy of Caenorhabditis elegans. Detail |
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wbls |
C. elegans development ontology |
A structured controlled vocabulary of the development of Caenorhabditis elegans. Detail |
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wbphenotype |
C. elegans phenotype |
A structured controlled vocabulary of Caenorhabditis elegans phenotypes Detail |
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xao |
Xenopus Anatomy Ontology |
XAO represents the anatomy and development of the African frogs Xenopus laevis and tropicalis. Detail |
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xco |
Experimental condition ontology |
Conditions under which physiological and morphological measurements are made both in the clinic and in studies involving humans or model ... Detail |
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xlmod |
HUPO-PSI cross-linking and derivatization reagents controlled vocabulary |
A structured controlled vocabulary for cross-linking reagents used with proteomics mass spectrometry. Detail |
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xpo |
Xenopus Phenotype Ontology |
XPO represents anatomical, cellular, and gene function phenotypes occurring throughout the development of the African frogs Xenopus laevi... Detail |
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zeco |
Zebrafish Experimental Conditions Ontology |
Experimental conditions applied to zebrafish, developed to facilitate experiment condition annotation at ZFIN Detail |
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zfa |
Zebrafish anatomy and development ontology |
A structured controlled vocabulary of the anatomy and development of the Zebrafish Detail |
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zfs |
Zebrafish developmental stages ontology |
Developmental stages of the Zebrafish Detail |
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zp |
Zebrafish Phenotype Ontology |
The Zebrafish Phenotype Ontology formally defines all phenotypes of the Zebrafish model organism. Detail |
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gsso |
Gender, Sex, and Sexual Orientation (GSSO) ontology |
The Gender, Sex, and Sexual Orientation (GSSO) ontology has terms for annotating interdisciplinary information concerning gender, sex, an... Detail |
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hp |
Human Phenotype Ontology |
A structured and controlled vocabulary for the phenotypic features encountered in human hereditary and other disease. Detail |
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kisao |
Kinetic Simulation Algorithm Ontology |
A classification of algorithms for simulating biology, their parameters, and their outputs Detail |
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sbo |
Systems Biology Ontology |
Terms commonly used in Systems Biology, and in particular in computational modeling. Detail |
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scdo |
Sickle Cell Disease Ontology |
An ontology for the standardization of terminology and integration of knowledge about Sickle Cell Disease. Detail |
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fix |
Physico-chemical methods and properties |
An ontology of physico-chemical methods and properties. Detail |
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mamo |
Mathematical modeling ontology |
The Mathematical Modelling Ontology (MAMO) is a classification of the types of mathematical models used mostly in the life sciences, thei... Detail |
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rex |
Physico-chemical process |
An ontology of physico-chemical processes, i.e. physico-chemical changes occurring in course of time. Detail |
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sibo |
Social Insect Behavior Ontology |
Social Behavior in insects Detail |
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vario |
Variation Ontology |
Variation Ontology, VariO, is an ontology for standardized, systematic description of effects, consequences and mechanisms of variations. Detail |
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eupath |
VEuPathDB ontology |
An ontology is developed to support Eukaryotic Pathogen, Host & Vector Genomics Resource (VEuPathDB; https://veupathdb.org). inactive Detail |
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fbbi |
Biological Imaging Methods Ontology |
A structured controlled vocabulary of sample preparation, visualization and imaging methods used in biomedical research. inactive Detail |
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mfmo |
Mammalian Feeding Muscle Ontology |
The Mammalian Feeding Muscle Ontology is an antomy ontology for the muscles of the head and neck that participate in feeding, swallowing,... inactive Detail |
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micro |
Ontology of Prokaryotic Phenotypic and Metabolic Characters |
An ontology of prokaryotic phenotypic and metabolic characters inactive Detail |
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ogsf |
Ontology of Genetic Susceptibility Factor |
An application ontology to represent genetic susceptibility to a specific disease, adverse event, or a pathological process. inactive Detail |
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olatdv |
Medaka Developmental Stages |
Life cycle stages for Medaka inactive Detail |
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pdumdv |
Platynereis Developmental Stages |
Life cycle stages for Platynereis dumerilii inactive Detail |
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aeo |
Anatomical Entity Ontology |
AEO is an ontology of anatomical structures that expands CARO, the Common Anatomy Reference Ontology inactive Detail |
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ceph |
Cephalopod Ontology |
An anatomical and developmental ontology for cephalopods inactive Detail |
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ehdaa2 |
Human developmental anatomy, abstract |
A structured controlled vocabulary of stage-specific anatomical structures of the developing human. inactive Detail |
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fma |
Foundational Model of Anatomy Ontology (subset) |
This is currently a slimmed down version of FMA inactive Detail |
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gaz |
Gazetteer |
A gazetteer constructed on ontological principles. The countries are actively maintained. inactive Detail |
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idomal |
Malaria Ontology |
An application ontology to cover all aspects of malaria as well as the intervention attempts to control it. inactive Detail |
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miro |
Mosquito insecticide resistance |
Application ontology for entities related to insecticide resistance in mosquitos inactive Detail |
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rnao |
RNA ontology |
Controlled vocabulary pertaining to RNA function and based on RNA sequences, secondary and three-dimensional structures. inactive Detail |
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tads |
Tick Anatomy Ontology |
The anatomy of the Tick, Families: Ixodidae, Argassidae inactive Detail |
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tgma |
Mosquito gross anatomy ontology |
A structured controlled vocabulary of the anatomy of mosquitoes. inactive Detail |
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upa |
Unipathway |
A manually curated resource for the representation and annotation of metabolic pathways inactive Detail |
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aao |
Amphibian gross anatomy |
obsolete Detail |
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adw |
Animal natural history and life history |
obsolete Detail |
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aero |
Adverse Event Reporting Ontology |
The Adverse Event Reporting Ontology (AERO) is an ontology aimed at supporting clinicians at the time of data entry, increasing quality a... obsolete Detail |
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ato |
Amphibian taxonomy |
obsolete Detail |
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bcgo |
Beta Cell Genomics Ontology |
An application ontology built for beta cell genomics studies. obsolete Detail |
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bila |
Bilateria anatomy |
obsolete Detail |
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bootstrep |
Gene Regulation Ontology |
obsolete Detail |
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cmf |
CranioMaxilloFacial ontology |
obsolete Detail |
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dc_cl |
Dendritic cell |
obsolete Detail |
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dinto |
The Drug-Drug Interactions Ontology |
A formal represention for drug-drug interactions knowledge. obsolete Detail |
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ehda |
Human developmental anatomy, timed version |
obsolete Detail |
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ehdaa |
Human developmental anatomy, abstract version |
obsolete Detail |
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emap |
Mouse gross anatomy and development, timed |
A structured controlled vocabulary of stage-specific anatomical structures of the mouse (Mus). obsolete Detail |
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eo |
Plant Environment Ontology |
A structured, controlled vocabulary which describes the treatments, growing conditions, and/or study types used in plant biology experime... obsolete Detail |
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epo |
Epidemiology Ontology |
An ontology designed to support the semantic annotation of epidemiology resources obsolete Detail |
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ero |
eagle-i resource ontology |
An ontology of research resources such as instruments. protocols, reagents, animal models and biospecimens. obsolete Detail |
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ev |
eVOC (Expressed Sequence Annotation for Humans) |
obsolete Detail |
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fbsp |
Fly taxonomy |
The taxonomy of the family Drosophilidae (largely after Baechli) and of other taxa referred to in FlyBase. obsolete Detail |
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flu |
Influenza Ontology |
obsolete Detail |
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gro |
Cereal Plant Gross Anatomy |
obsolete Detail |
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habronattus |
Habronattus courtship |
obsolete Detail |
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iev |
Event (INOH pathway ontology) |
obsolete Detail |
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imr |
Molecule role (INOH Protein name/family name ontology) |
obsolete Detail |
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ipr |
Protein Domains |
obsolete Detail |
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lipro |
Lipid Ontology |
An ontology representation of the LIPIDMAPS nomenclature classification. obsolete Detail |
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loggerhead |
Loggerhead nesting |
obsolete Detail |
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mao |
Multiple alignment |
obsolete Detail |
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mat |
Minimal anatomical terminology |
obsolete Detail |
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mfo |
Medaka fish anatomy and development |
A structured controlled vocabulary of the anatomy and development of the Japanese medaka fish, Oryzias latipes. obsolete Detail |
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mirnao |
microRNA Ontology |
An application ontology for use with miRNA databases. obsolete Detail |
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mo |
Microarray experimental conditions |
A standardized description of a microarray experiment in support of MAGE v.1. obsolete Detail |
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nif_cell |
NIF Cell |
Neuronal cell types obsolete Detail |
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nif_dysfunction |
NIF Dysfunction |
obsolete Detail |
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nif_grossanatomy |
NIF Gross Anatomy |
obsolete Detail |
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nmr |
NMR-instrument specific component of metabolomics investigations |
Descriptors relevant to the experimental conditions of the Nuclear Magnetic Resonance (NMR) component in a metabolomics investigation. obsolete Detail |
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obo_rel |
OBO relationship types (legacy) |
obsolete Detail |
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ogi |
Ontology for genetic interval |
An ontology that formalizes the genomic element by defining an upper class genetic interval obsolete Detail |
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omiabis |
Ontologized MIABIS |
An ontological version of MIABIS (Minimum Information About BIobank data Sharing) obsolete Detail |
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pao |
Plant Anatomy Ontology |
obsolete Detail |
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pd_st |
Platynereis stage ontology |
obsolete Detail |
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pgdso |
Plant Growth and Development Stage |
obsolete Detail |
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plo |
Plasmodium life cycle |
obsolete Detail |
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propreo |
Proteomics data and process provenance |
obsolete Detail |
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resid |
Protein covalent bond |
For the description of covalent bonds in proteins. obsolete Detail |
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sao |
Subcellular anatomy ontology |
obsolete Detail |
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sep |
Sample processing and separation techniques |
A structured controlled vocabulary for the annotation of sample processing and separation techniques in scientific experiments. obsolete Detail |
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sopharm |
Suggested Ontology for Pharmacogenomics |
obsolete Detail |
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tahe |
Terminology of Anatomy of Human Embryology |
obsolete Detail |
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tahh |
Terminology of Anatomy of Human Histology |
obsolete Detail |
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tao |
Teleost Anatomy Ontology |
Multispecies fish anatomy ontology. Originally seeded from ZFA, but intended to cover terms relevant to other taxa obsolete Detail |
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vhog |
Vertebrate Homologous Ontology Group Ontology |
obsolete Detail |
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vsao |
Vertebrate Skeletal Anatomy Ontology- |
Vertebrate skeletal anatomy ontology. obsolete Detail |
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ypo |
Yeast phenotypes |
obsolete Detail |
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zea |
Maize gross anatomy |
obsolete Detail |
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