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Intramolecular [3 + 2] Cycloaddition Reactions of Unsaturated Nitrile Oxides. A Study from the Perspective of Bond Evolution Theory (BET)

  • Abel Idrice Adjieufack
    Abel Idrice Adjieufack
    Physical and Theoretical Chemistry of Laboratory, University of Yaoundé 1, Yaoundé, Cameroon
    Laboratory of Theoretical Chemistry (LCT) and Namur Institute of Structured Matter (NISM), University of Namur, Rue de Bruxelles, 61, B-5000 Namur, Belgium
  • Vincent Liégeois*
    Vincent Liégeois
    Laboratory of Theoretical Chemistry (LCT) and Namur Institute of Structured Matter (NISM), University of Namur, Rue de Bruxelles, 61, B-5000 Namur, Belgium
    *E-mail: [email protected]
  • Ibrahim Ndassa Mboumbouo
    Ibrahim Ndassa Mboumbouo
    Department of Chemistry, High Teacher Training College, University of Yaoundé 1, Yaoundé, Cameroon
  • Joseph Ketcha Mbadcam
    Joseph Ketcha Mbadcam
    Physical and Theoretical Chemistry of Laboratory, University of Yaoundé 1, Yaoundé, Cameroon
  • , and 
  • Benoît Champagne
    Benoît Champagne
    Laboratory of Theoretical Chemistry (LCT) and Namur Institute of Structured Matter (NISM), University of Namur, Rue de Bruxelles, 61, B-5000 Namur, Belgium
Cite this: J. Phys. Chem. A 2018, 122, 37, 7472–7481
Publication Date (Web):August 24, 2018
https://doi.org/10.1021/acs.jpca.8b06711
Copyright © 2018 American Chemical Society

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    Abstract

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    The reaction mechanism of the [3 + 2] intramolecular cycloaddition of 3,3-dimethyl-2-(prop-2-en-1-yloxy) and (prop-2-en-1-ylsulfanyl) nitrile oxides is analyzed using different DFT functionals with the 6-311++G(d,p) basis set. The activation and the reaction energies for the cis and trans pathways are evaluated at the DFT, MP2, and CCSD(T) levels of theory as well as their Gibbs free energy counterparts. It is shown that the trans regioisomers are both thermodynamic and kinetic compounds, in agreement with experimental outcomes. For a deeper understanding of the reaction mechanism, a BET analysis along the reaction channel (trans and cis) has been carried out. This analysis reveals that the lone pair on the nitrogen atom is formed first, then the C–C bond, and finally the O–C one. The global mechanism is similar for the two compounds and for the two pathways even if some small differences are observed, for instance, in the values of the reaction coordinates of appeareance of the different basins.

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    The Supporting Information is available free of charge on the ACS Publications website at DOI: 10.1021/acs.jpca.8b06711.

    • Tables of the electronic energies, enthalpies, entropies, and Gibbs free energies and figures showing the population evolutions and ELF basin isosurfaces (PDF)

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    Cited By

    This article is cited by 18 publications.

    1. Abel Idrice Adjieufack, Jean Moto Ongagna, Ariane Pouyewo Tenambo, Ernest Opoku, Ibrahim Ndassa Mbouombouo. How a Chromium Tricarbonyl Complex Catalyzes the [3 + 2] Cycloaddition Reaction of N-Substituted Phenylnitrones with Styrene: A Molecular Electron Density Theory Analysis. Organometallics 2022, 41 (24) , 3809-3822. https://doi.org/10.1021/acs.organomet.2c00394
    2. Leandro Ayarde-Henríquez, Cristian Guerra, Mario Duque-Noreña, Elizabeth Rincón, Patricia Pérez, Eduardo Chamorro. Are There Only Fold Catastrophes in the Diels–Alder Reaction Between Ethylene and 1,3-Butadiene?. The Journal of Physical Chemistry A 2021, 125 (23) , 5152-5165. https://doi.org/10.1021/acs.jpca.1c01448
    3. Emna Cherni, Abel Idrice Adjieufack, Benoît Champagne, Manef Abderrabba, Sameh Ayadi, Vincent Liégeois. Density Functional Theory Investigation of the Binding of ThioTEPA to Purine Bases: Thermodynamics and Bond Evolution Theory Analysis. The Journal of Physical Chemistry A 2020, 124 (20) , 4068-4080. https://doi.org/10.1021/acs.jpca.0c01792
    4. Leandro Ayarde-Henríquez, Jacopo Lupi, Stephen Dooley. Hemicellulose pyrolysis: mechanism and kinetics of functionalized xylopyranose. Physical Chemistry Chemical Physics 2024, 26 (16) , 12820-12837. https://doi.org/10.1039/D3CP06094B
    5. Leandro Ayarde-Henríquez, Cristian Guerra, Mario Duque-Noreña, Eduardo Chamorro. Revisiting the bonding evolution theory: a fresh perspective on the ammonia pyramidal inversion and bond dissociations in ethane and borazane. Physical Chemistry Chemical Physics 2023, 25 (40) , 27394-27408. https://doi.org/10.1039/D3CP03572G
    6. Eduardo Chamorro, Cristian Guerra, Leandro Ayarde-Henríquez, Mario Duque-Noreña, Patricia Pérez, Elizabeth Rincón. New insights from a bonding evolution theory based on the topological analysis of the electron localization function. 2023, 465-481. https://doi.org/10.1016/B978-0-32-390257-1.00023-1
    7. Abel Idrice Adjieufack, Juan Andrés, Mónica Oliva, Vicent Sixte Safont. Deciphering the Molecular Mechanism of Intramolecular Reactions from the Perspective of Bonding Evolution Theory. Physchem 2022, 2 (3) , 207-223. https://doi.org/10.3390/physchem2030015
    8. Maraf Bake Mbah, Abel Idrice Adjieufack, Charnel Nguemo Nguimkeu, Alhadji Malloum, Auguste Abouem A Zintchem, Gouet Bebga, Ibrahim Mbouombouo Ndassa. Unraveling the sequence of electron flow along the cyclocondensation reaction between ciprofloxacin and thiosemicarbazide through the bonding evolution theory. Journal of Molecular Graphics and Modelling 2022, 113 , 108141. https://doi.org/10.1016/j.jmgm.2022.108141
    9. Mbah Bake Maraf, Adjieufack Abel Idrice, Manwal A. Mekoung Pélagie, Auguste Abouem A. Zintchem, Gouet Bebga, Lydia Rhyman, Mbouombouo Ndassa Ibrahim, Ponnadurai Ramasami. Decoding the reaction mechanism of the cyclocondensation of ethyl acetate2‐oxo‐2‐( 4‐oxo‐4 H ‐pyrido [1.2‐a] pyrimidin‐3‐yl) polyazaheterocycle and ethylenediamine using bond evolution theory. Journal of Computational Chemistry 2022, 43 (14) , 972-985. https://doi.org/10.1002/jcc.26853
    10. Mohamed Chellegui, Benoît Champagne, Mahmoud Trabelsi. Lewis acid-catalyzed Diels–Alder cycloaddition of 2,5-dimethylfuran and ethylene: a density functional theory investigation. Theoretical Chemistry Accounts 2022, 141 (4) https://doi.org/10.1007/s00214-022-02880-y
    11. Atazaz Ahsin, Khurshid Ayub. Extremely large static and dynamic nonlinear optical response of small superalkali clusters NM3M’ (M, M’=Li, Na, K). Journal of Molecular Graphics and Modelling 2021, 109 , 108031. https://doi.org/10.1016/j.jmgm.2021.108031
    12. Abel Idrice Adjieufack, Jean Moto Ongagna, Joseline Flore Kenmogne Tchidjo, Ibrahim Mbouombouo Ndassa. Topological unraveling of the [3+2] cycloaddition (32CA) reaction between N -methylphenylnitrone and styrene catalyzed by the chromium tricarbonyl complex using electron localization function and catastrophe theory. New Journal of Chemistry 2021, 45 (43) , 20342-20351. https://doi.org/10.1039/D1NJ04121E
    13. Abel Idrice Adjieufack, Maraf Mbah Bake, Charnel Nguemo Nguimkeu, Julien Pilmé, Ibrahim Mbouombouo Ndassa. Exploring The Sequence of Electron Density Along The Chemical Reactions Between Carbonyl Oxides And Ammonia/Water Using Bond Evolution Theory. ChemPhysChem 2021, 22 (17) , 1792-1801. https://doi.org/10.1002/cphc.202100221
    14. Abel Idrice Adjieufack, Vincent Liégeois, Ibrahim Mbouombouo Ndassa, Benoît Champagne. Topological investigation of the reaction mechanism of glycerol carbonate decomposition by bond evolution theory. RSC Advances 2021, 11 (17) , 10083-10093. https://doi.org/10.1039/D0RA09755A
    15. Asma Merouane, Asmaa Mostefai, Djebar Hadji, Ali Rahmouni, Mohamed Bouchekara, Amina Ramdani, Safia Taleb. Theoretical insights into the static chemical reactivity and NLO properties of some conjugated carbonyl compounds: case of 5-aminopenta-2,4-dienal derivatives. Monatshefte für Chemie - Chemical Monthly 2020, 151 (7) , 1095-1109. https://doi.org/10.1007/s00706-020-02653-y
    16. Adjieufack Abel Idrice, Djogang Lucie Karelle, Lekene Ngouateu Rene Blaise, Mbah Bake Maraf, Nana Nouhou Cyrille, Emadak Alphonse, Ketcha Joseph Mbadcam, Mbouombouo Ndassa Ibrahim. Unraveling the sequence of electron flows along the reaction mechanism by quantum topological tools: The 32CA reaction of acetonitrile oxide with 7-bromo-oxanorborn-5-en-2-one. Journal of Molecular Graphics and Modelling 2020, 96 , 107513. https://doi.org/10.1016/j.jmgm.2019.107513
    17. Grzegorz Mlostoń, Radomir Jasiński, Karolina Kula, Heinz Heimgartner. A DFT Study on the Barton–Kellogg Reaction – The Molecular Mechanism of the Formation of Thiiranes in the Reaction between Diphenyldiazomethane and Diaryl Thioketones. European Journal of Organic Chemistry 2020, 2020 (2) , 176-182. https://doi.org/10.1002/ejoc.201901443
    18. Abel I. Adjieufack, Maraf Mbah Bake, Joseph Ketcha Mbadcam, Ibrahim Mbouombouo Ndassa, Juan Andrés, Mónica Oliva, Vicent S. Safont. How effectively bonding evolution theory retrieves and visualizes curly arrows: The cycloaddition reaction of cyclic nitrones. International Journal of Quantum Chemistry 2019, 119 (19) https://doi.org/10.1002/qua.25985

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