Volume 20, Issue 4 p. 596-602

Modified TWINSPAN classification in which the hierarchy respects cluster heterogeneity

Jan Roleček

Corresponding Author

Jan Roleček

Department of Botany and Zoology, Masaryk University, Kotlálřská 2, CZ-611 37 Brno, Czech Republic

Department of Vegetation Ecology, Institute of Botany, Academy of Sciences of the Czech Republic, Pořiči 3b, C2 – 603 OO Brno, Czech Republic

*Corresponding author; Fax +420 532146213; E-mail [email protected]Search for more papers by this author
Lubomír Tichý

Lubomír Tichý

Department of Botany and Zoology, Masaryk University, Kotlálřská 2, CZ-611 37 Brno, Czech Republic

E-mail [email protected]

Search for more papers by this author
David Zelený

David Zelený

Department of Botany and Zoology, Masaryk University, Kotlálřská 2, CZ-611 37 Brno, Czech Republic

E-mail [email protected]

Search for more papers by this author
Milan Chytrý

Milan Chytrý

Department of Botany and Zoology, Masaryk University, Kotlálřská 2, CZ-611 37 Brno, Czech Republic

E-mail [email protected]

Search for more papers by this author
First published: 06 July 2009
Citations: 191

Co-ordinating editor: J. Oksanen.

Abstract

Aim: To propose a modification of the TWINSPAN algorithm that enables production of divisive classifications that better respect the structure of the data.

Methods: The proposed modification combines the classical TWINSPAN algorithm with analysis of heterogeneity of the clusters prior to each division. Four different heterogeneity measures are involved: Whittaker's beta, total inertia, average Sørensen dissimilarity and average Jaccard dissimilarity. Their performance was evaluated using empirical vegetation datasets with different numbers of plots and different levels of heterogeneity.

Results: While the classical TWINSPAN algorithm divides each cluster coming from the previous division step, the modified algorithm divides only the most heterogeneous cluster in each step. The four tested heterogeneity measures may produce identical or very similar results. However, average Jaccard and Sørensen dissimilarities may reach extreme values in clusters of small size and may produce classifications with a highly unbalanced cluster size.

Conclusions: The proposed modification does not alter the logic of the TWINSPAN classification, but it may change the hierarchy of divisions in the final classification. Thus, unsubstantiated divisions of homogeneous clusters are prevented, and classifications with any number of terminal clusters can be created, which increases the flexibility of TWINSPAN.

The full text of this article hosted at iucr.org is unavailable due to technical difficulties.