Genome-wide identification, in silico characterization and expression analysis of ZIP-like genes from Trichomonas vaginalis in response to Zinc and Iron

Biometals. 2017 Oct;30(5):663-675. doi: 10.1007/s10534-017-0034-x. Epub 2017 Jul 21.

Abstract

Trace elements such as Zinc and Iron are essential components of metalloproteins and serve as cofactors or structural elements for enzymes involved in several important biological processes in almost all organisms. Because either excess or insufficient levels of Zn and Fe can be harmful for the cells, the homeostatic levels of these trace minerals must be tightly regulated. The Zinc regulated transporter, Iron regulated transporter-like Proteins (ZIP) comprise a diverse family, with several paralogues in diverse organisms and are considered essential for the Zn and Fe uptake and homeostasis. Zn and Fe has been shown to regulate expression of proteins involved in metabolism and pathogenicity mechanisms in the protozoan pathogen Trichomonas vaginalis, in contrast high concentrations of these elements were also found to be toxic for T. vaginalis trophozoites. Nevertheless, Zn and Fe uptake and homeostasis mechanisms is not yet clear in this parasite. We performed a genome-wide analysis and localized the 8 members of the ZIP gene family in T. vaginalis (TvZIP1-8). The bioinformatic programs predicted that the TvZIP proteins are highly conserved and show similar properties to the reported in other ZIP orthologues. The expression patterns of TvZIP1, 3, 5 and 7 were diminished in presence of Zinc, while the rest of the TvZIP genes showed an unchanged profile in this condition. In addition, TvZIP2 and TvZIP4 showed a differential expression pattern in trophozoites growth under different Iron conditions. These results suggest that TvZIP genes encode membrane transporters that may be responsible for the Zn and Fe acquisition in T. vaginalis.

Keywords: Expression analysis; Gene family; Iron; Trichomonas vaginalis; ZIP transporters; Zinc.

MeSH terms

  • Amino Acid Sequence
  • Arabidopsis
  • Cation Transport Proteins / genetics*
  • Cation Transport Proteins / metabolism
  • Computational Biology
  • Ferrous Compounds / pharmacology
  • Gene Expression Regulation
  • Genome, Protozoan*
  • Homeostasis
  • Ion Transport
  • Iron / metabolism*
  • Protein Isoforms / genetics
  • Protein Isoforms / metabolism
  • Protozoan Proteins / genetics*
  • Protozoan Proteins / metabolism
  • Saccharomyces cerevisiae
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Trichomonas vaginalis / drug effects
  • Trichomonas vaginalis / genetics*
  • Trichomonas vaginalis / metabolism
  • Zinc / metabolism*
  • Zinc Sulfate / pharmacology

Substances

  • Cation Transport Proteins
  • Ferrous Compounds
  • Protein Isoforms
  • Protozoan Proteins
  • ferrous sulfate
  • Zinc Sulfate
  • Iron
  • Zinc